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35 resources · Curated orderClear filters
Methods

Optimization (scipy.optimize)

A solver-selection guide spanning local and global optimization, roots, constrained problems, linear programming and assignment.

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Methods

Ordinary Differential Equations

A guide to using ODE models in inference, including solver choices, stiffness, tolerances, parameter estimation and adjoint methods.

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Methods

permutation_test

A reference for permutation tests that distinguishes exchangeability structures, exact enumeration and randomized null sampling.

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Methods

Posterior and Prior Predictive Checks

A guide to prior and posterior predictive checks that compare replicated-data summaries with chosen aspects of observed data.

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Methods

Quasi-Monte Carlo

A guide to quasi-Monte Carlo sampling, discrepancy, scrambling and practical use of sampling engines.

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Methods

Reparameterization and Change of Variables

A guide distinguishing reparameterizations from changes of variables and explaining when log-Jacobian adjustments are required.

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Methods

Signal Processing (scipy.signal)

A signal-processing guide covering convolution, filtering, spectral estimation and short-time Fourier transforms.

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Methods

Simulation-Based Calibration Checking

A guide to checking Bayesian inference algorithms by simulating parameters and datasets from a model and examining posterior ranks or coverage.

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Methods

Sparse eigenvalue problems with ARPACK

A tutorial on extracting a few eigenpairs from sparse operators, including shift-invert mode and matrix-free interfaces.

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